
if you’re dealing with a profound loss, the after effects of tragedy or post traumatic stress you may be feeling spiritually dead. Maybe you think you’ve lost your faith or that God has left you. It may be helpful for you to know there are neurological reasons for this apparent loss of your spiritual senses.
When there is a traumatic event or a terrible loss in our lives, our brains are actually affected. Trauma can disrupt the brain’s ability to process spiritual experiences by affecting its prefrontal cortex, amygdala, hippocampus, and temporal lobes. These areas are also involved in emotional regulation, memory, and our sense of self, even our feeling of connection with something greater than ourselves. Dysfunction in these regions can lead to a disconcerting loss of or distortion in a person’s spiritual life. It’s difficult for us to feel God with us, or to reach the peace we used to find in prayer and the practice of our faith.
The prefrontal cortex is responsible for self-reflection and focus. It helps us in practices like contemplative prayer and meditation by supporting awareness and attention. When this part of the brain is dealing with trauma we can’t seem to relax. We may feel void of any spirituality at all. Even the sacraments we believe in feel oddly empty as if we are merely spectators. Everything may seem meaningless to us now because the brain is preoccupied with stress and survival due to its injuries from trauma.
The amygdala and hippocampus process emotions, especially fear and joy. It gives us a sense of our life stories, of our own history. Spiritual experiences often evoke intense emotions and build on a relationship with God that we have developed over time. Trauma can even shrink the hippocampus . It may be hard to remember the love we once knew with God. Without this memory of the lived experience of God’s love and mercy, it’s hard to trust the Lord or that he is still there at all.
With post traumatic stress the amygdala becomes hyperactive, keeping our brains in a state of fear and hypervigilance. We might also feel emotionally overwhelmed and dysregulated making daily life difficult let alone communion with God.
The temporal lobes of the brain are associated with mystical experiences, and our perception of religious imagery. They also help us integrate our sensory experiences in life into spiritual meaning. Sustaining trauma can cause either overactivation or underactivation of the temporal lobes. This can lead to either intense visions or else fear-based religious thoughts. On the other hand, we may feel emotionally and spiritually blank. Where is God?
“God my God, why have you forsaken me?” Mark 15:33-34
Our anterior cingulate cortex helps us feel empathy and compassion. It’s also involved in the regulation of emotions and our sense of the Divine.The damage of trauma can impair the ACC. We may feel lost, cut off emotionally from our friends. We feel empty and alienated from people and God.
“Friend and neighbor you have taken away.
My one companion is darkness.” Ps. 88:18
The insula processes sensations and emotions, contributing to a sense of the nearness of God or a feeling of transcendence during prayer or meditation.Trauma can impair the functioning of the insula leading to either low body awareness or too much of it. We can feel a strange detachment from our bodies, unaware of even our physical needs. Conversely we may be overwhelmed by physical sensations, making it hard to relax or focus when we want to pray.
The good news is that contemplative prayer and meditation have been shown to be healing and even restorative to these areas of the brain impaired by trauma. Interior prayer practices and meditation can calm the amygdala, improve prefrontal cortex regulation, and enhance the connectivity of the ACC and insula, restoring emotional balance and renewing our sense of connection.
It means a lot to me that Jesus experienced trauma and that he allowed himself to descend into the depths of the abyss of abandonment when he cried out from the cross his desolation.
St. John of the Cross taught about the “Dark Night of the Soul,” a phase of the spiritual life of many Christian contemplatives and mystics, which seems to have similar effects as trauma does on our prayer life. St. John of the Cross wrote that “in the dark night of the soul, bright flows the river of God.” He teaches us that God is nearer than ever before at times we feel he is farthest away. He says to go on “naked faith” and not to give up.

I have found it true that “God is close to the broken hearted, those whose spirit is crushed he will save.” (Psalm 34:18)
So if you are grieving a tragedy, experiencing trauma or post traumatic stress, and your’re having trouble with spirituality as a result don’t blame yourself. You haven’t done anything wrong. Nor have you lost God.
We know Mary and Joseph were holy and faithful people but they still lost Jesus for three days. Maybe you feel bereft but he is still there in the temple of your heart and you will find him again just as they did.

It’s ok to pray in ways you can handle. Don’t hold yourself to what you used to do. For me emotional overwhelm kept me from deeper methods of prayer after a tragedy in my life. I talked to Jesus about it. I told him, “I still love you. I just need you not to come so close for now. Can you sit farther away but still nearby?” So he sat with me but not too close. I chose what felt to me a less personal or emotional method of prayer. I memorized psalms, set prayers or passages from the mystics I love like St. Teresa of Avila and Julian of Norwich. When I could handle it I sat quietly and slowly went over them in my mind as a form of prayer/meditation. Other times all I could do was hold my rosary. These things slowly began to bring me peace again.
My friend Jim had said “the devil will try to kick you when you’re down and darkness tries to overwhelm you at times like this so keep doing the things that are of light: the rosary, going to mass, whatever you can do.” He said that would keep my lamp alight no matter what I was going through. He was right.
And after all:
“The light shines in the darkness, and the darkness has not overcome it.” John 1:5




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